Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPRAP08240 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPRAP08240 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPRAP08240 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRPRAP08240 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPRAP08240 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.19■□□□□ 0.34
SRPRAP08240 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPRAP08240 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPRAP08240 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.19■□□□□ 0.34
SRPRAP08240 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.19■□□□□ 0.34
SRPRAP08240 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SRPRAP08240 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.18■□□□□ 0.34
SRPRAP08240 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 LINC00896-202ENST00000609602 2128 ntBASIC17.18■□□□□ 0.34
SRPRAP08240 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.18■□□□□ 0.34
SRPRAP08240 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SRPRAP08240 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.18■□□□□ 0.34
SRPRAP08240 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.18■□□□□ 0.34
SRPRAP08240 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.18■□□□□ 0.34
SRPRAP08240 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SRPRAP08240 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.18■□□□□ 0.34
SRPRAP08240 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.18■□□□□ 0.34
SRPRAP08240 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
SRPRAP08240 CNN2P11-201ENST00000429351 262 ntBASIC17.18■□□□□ 0.34
SRPRAP08240 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.18■□□□□ 0.34
SRPRAP08240 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.18■□□□□ 0.34
SRPRAP08240 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.18■□□□□ 0.34
SRPRAP08240 AP000344.2-201ENST00000512987 629 ntBASIC17.18■□□□□ 0.34
SRPRAP08240 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.18■□□□□ 0.34
SRPRAP08240 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.18■□□□□ 0.34
SRPRAP08240 AC124947.2-201ENST00000547118 1133 ntBASIC17.18■□□□□ 0.34
SRPRAP08240 DUX4L17-201ENST00000557360 1267 ntBASIC17.18■□□□□ 0.34
SRPRAP08240 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.18■□□□□ 0.34
SRPRAP08240 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 LINC02012-201ENST00000608206 1725 ntBASIC17.18■□□□□ 0.34
SRPRAP08240 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SRPRAP08240 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPRAP08240 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.18■□□□□ 0.34
SRPRAP08240 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SRPRAP08240 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.17■□□□□ 0.34
SRPRAP08240 CROCCP2-202ENST00000412962 2773 ntBASIC17.17■□□□□ 0.34
SRPRAP08240 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SRPRAP08240 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.17■□□□□ 0.34
SRPRAP08240 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.17■□□□□ 0.34
SRPRAP08240 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SRPRAP08240 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 HMGA1P7-201ENST00000406908 502 ntBASIC17.17■□□□□ 0.34
SRPRAP08240 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.17■□□□□ 0.34
SRPRAP08240 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SRPRAP08240 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.17■□□□□ 0.34
SRPRAP08240 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SRPRAP08240 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
SRPRAP08240 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.17■□□□□ 0.34
SRPRAP08240 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SRPRAP08240 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SRPRAP08240 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 AL121761.2-201ENST00000598007 1648 ntBASIC17.17■□□□□ 0.34
SRPRAP08240 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPRAP08240 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.16■□□□□ 0.34
SRPRAP08240 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
SRPRAP08240 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRPRAP08240 KRT8P49-201ENST00000604166 1432 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms