Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RHOP08100 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.58■□□□□ 0.41
RHOP08100 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
RHOP08100 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOP08100 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.58■□□□□ 0.4
RHOP08100 SLC25A1P3-201ENST00000395415 828 ntBASIC17.58■□□□□ 0.4
RHOP08100 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RHOP08100 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RHOP08100 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.58■□□□□ 0.4
RHOP08100 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RHOP08100 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.58■□□□□ 0.4
RHOP08100 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.58■□□□□ 0.4
RHOP08100 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.58■□□□□ 0.4
RHOP08100 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.58■□□□□ 0.4
RHOP08100 AC140878.1-201ENST00000565277 250 ntBASIC17.58■□□□□ 0.4
RHOP08100 MIR3909-201ENST00000579518 119 ntBASIC17.58■□□□□ 0.4
RHOP08100 AC008267.7-201ENST00000624570 1194 ntBASIC17.58■□□□□ 0.4
RHOP08100 AP001350.2-201ENST00000625104 1094 ntBASIC17.58■□□□□ 0.4
RHOP08100 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.58■□□□□ 0.4
RHOP08100 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOP08100 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.58■□□□□ 0.4
RHOP08100 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOP08100 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RHOP08100 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RHOP08100 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOP08100 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOP08100 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOP08100 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 FO538757.1-201ENST00000623083 1397 ntBASIC17.57■□□□□ 0.4
RHOP08100 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.57■□□□□ 0.4
RHOP08100 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOP08100 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.57■□□□□ 0.4
RHOP08100 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.57■□□□□ 0.4
RHOP08100 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOP08100 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOP08100 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.57■□□□□ 0.4
RHOP08100 MPDU1-223ENST00000582151 728 ntBASIC17.57■□□□□ 0.4
RHOP08100 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.57■□□□□ 0.4
RHOP08100 AC027307.2-201ENST00000591252 911 ntBASIC17.57■□□□□ 0.4
RHOP08100 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.57■□□□□ 0.4
RHOP08100 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOP08100 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 AC131009.4-201ENST00000624048 1740 ntBASIC17.57■□□□□ 0.4
RHOP08100 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.57■□□□□ 0.4
RHOP08100 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOP08100 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.57■□□□□ 0.4
RHOP08100 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RHOP08100 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOP08100 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RHOP08100 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOP08100 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOP08100 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RHOP08100 TREML5P-201ENST00000421694 576 ntBASIC17.56■□□□□ 0.4
RHOP08100 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.56■□□□□ 0.4
RHOP08100 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOP08100 ALG1L8P-201ENST00000533887 760 ntBASIC17.56■□□□□ 0.4
RHOP08100 AP000842.3-202ENST00000569238 1080 ntBASIC17.56■□□□□ 0.4
RHOP08100 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RHOP08100 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOP08100 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOP08100 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RHOP08100 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.56■□□□□ 0.4
RHOP08100 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
RHOP08100 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOP08100 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHOP08100 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHOP08100 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
RHOP08100 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RHOP08100 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms