Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 ARMC10P1-201ENST00000313754 855 ntBASIC15.41■□□□□ 0.06
HLA-DPB1P04440 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 AC124947.2-201ENST00000547118 1133 ntBASIC15.41■□□□□ 0.06
HLA-DPB1P04440 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 GPR32P1-201ENST00000601788 811 ntBASIC15.41■□□□□ 0.06
HLA-DPB1P04440 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 AL596257.1-201ENST00000641463 2694 ntBASIC15.4■□□□□ 0.06
HLA-DPB1P04440 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 AL353692.3-201ENST00000407031 1396 ntBASIC15.4■□□□□ 0.06
HLA-DPB1P04440 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 AL136038.3-201ENST00000561909 1096 ntBASIC15.4■□□□□ 0.06
HLA-DPB1P04440 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 AL121956.5-201ENST00000625261 221 ntBASIC15.4■□□□□ 0.06
HLA-DPB1P04440 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 AC005332.1-201ENST00000577698 1310 ntBASIC15.4■□□□□ 0.06
HLA-DPB1P04440 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DPB1P04440 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 SLC25A1P3-201ENST00000395415 828 ntBASIC15.39■□□□□ 0.05
HLA-DPB1P04440 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DPB1P04440 FAM86EP-206ENST00000510506 987 ntBASIC15.39■□□□□ 0.05
HLA-DPB1P04440 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms