Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.05□□□□□ -0.32
TCRAP04437 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TCRAP04437 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 AL596257.1-201ENST00000641463 2694 ntBASIC13.05□□□□□ -0.32
TCRAP04437 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRAP04437 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.04□□□□□ -0.32
TCRAP04437 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TCRAP04437 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.04□□□□□ -0.32
TCRAP04437 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.04□□□□□ -0.32
TCRAP04437 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TCRAP04437 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 MMP23A-201ENST00000234610 1017 ntBASIC13.04□□□□□ -0.32
TCRAP04437 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.04□□□□□ -0.32
TCRAP04437 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.04□□□□□ -0.32
TCRAP04437 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.04□□□□□ -0.32
TCRAP04437 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TCRAP04437 SNORA78-201ENST00000459373 127 ntBASIC13.04□□□□□ -0.32
TCRAP04437 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.04□□□□□ -0.32
TCRAP04437 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.04□□□□□ -0.32
TCRAP04437 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.04□□□□□ -0.32
TCRAP04437 AC111152.3-201ENST00000569699 673 ntBASIC13.04□□□□□ -0.32
TCRAP04437 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.04□□□□□ -0.32
TCRAP04437 AC140113.3-201ENST00000605663 199 ntBASIC13.04□□□□□ -0.32
TCRAP04437 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 AL023973.1-201ENST00000624619 620 ntBASIC13.04□□□□□ -0.32
TCRAP04437 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.04□□□□□ -0.32
TCRAP04437 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.04□□□□□ -0.32
TCRAP04437 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TCRAP04437 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRAP04437 GPR89P-201ENST00000407924 1495 ntBASIC13.04□□□□□ -0.32
TCRAP04437 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.03□□□□□ -0.32
TCRAP04437 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TCRAP04437 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TCRAP04437 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.03□□□□□ -0.32
TCRAP04437 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.03□□□□□ -0.32
TCRAP04437 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TCRAP04437 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.03□□□□□ -0.32
TCRAP04437 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TCRAP04437 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TCRAP04437 AC007967.3-201ENST00000434308 558 ntBASIC13.03□□□□□ -0.32
TCRAP04437 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRAP04437 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.03□□□□□ -0.32
TCRAP04437 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRAP04437 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRAP04437 TSPY26P-202ENST00000565928 3884 ntBASIC13.03□□□□□ -0.32
TCRAP04437 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRAP04437 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 AL391256.1-201ENST00000443260 1855 ntBASIC13.03□□□□□ -0.32
TCRAP04437 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
TCRAP04437 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TCRAP04437 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.03□□□□□ -0.32
TCRAP04437 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.03□□□□□ -0.32
TCRAP04437 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TCRAP04437 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
TCRAP04437 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.03□□□□□ -0.32
TCRAP04437 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TCRAP04437 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms