Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
APOC1P02654 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.16■□□□□ 0.02
APOC1P02654 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 AC233702.3-201ENST00000578656 1387 ntBASIC15.16■□□□□ 0.02
APOC1P02654 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
APOC1P02654 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
APOC1P02654 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.16■□□□□ 0.02
APOC1P02654 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 PCED1CP-201ENST00000419887 785 ntBASIC15.16■□□□□ 0.02
APOC1P02654 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.16■□□□□ 0.02
APOC1P02654 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.16■□□□□ 0.02
APOC1P02654 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.16■□□□□ 0.02
APOC1P02654 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
APOC1P02654 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.16■□□□□ 0.02
APOC1P02654 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
APOC1P02654 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
APOC1P02654 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
APOC1P02654 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
APOC1P02654 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
APOC1P02654 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
APOC1P02654 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC1P02654 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.15■□□□□ 0.02
APOC1P02654 AC009336.1-201ENST00000608941 1553 ntBASIC15.15■□□□□ 0.02
APOC1P02654 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
APOC1P02654 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 IER3-202ENST00000376377 1350 ntBASIC15.15■□□□□ 0.02
APOC1P02654 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
APOC1P02654 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
APOC1P02654 KLF4P1-201ENST00000412782 1185 ntBASIC15.15■□□□□ 0.02
APOC1P02654 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.15■□□□□ 0.02
APOC1P02654 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.15■□□□□ 0.02
APOC1P02654 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
APOC1P02654 AC124947.2-201ENST00000547118 1133 ntBASIC15.15■□□□□ 0.02
APOC1P02654 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.15■□□□□ 0.02
APOC1P02654 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.15■□□□□ 0.02
APOC1P02654 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
APOC1P02654 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.15■□□□□ 0.02
APOC1P02654 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.15■□□□□ 0.02
APOC1P02654 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.15■□□□□ 0.02
APOC1P02654 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.15■□□□□ 0.02
APOC1P02654 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.15■□□□□ 0.02
APOC1P02654 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
APOC1P02654 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC1P02654 TP73-AS1-210ENST00000637775 1455 ntBASIC15.14■□□□□ 0.01
APOC1P02654 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
APOC1P02654 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC1P02654 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.14■□□□□ 0.01
APOC1P02654 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
APOC1P02654 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC1P02654 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.14■□□□□ 0.01
APOC1P02654 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOC1P02654 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.14■□□□□ 0.01
APOC1P02654 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC1P02654 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms