Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
TIMP1P01033 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 BTBD7P1-201ENST00000447253 1453 ntBASIC18.26■□□□□ 0.51
TIMP1P01033 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TIMP1P01033 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.25■□□□□ 0.51
TIMP1P01033 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.25■□□□□ 0.51
TIMP1P01033 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.25■□□□□ 0.51
TIMP1P01033 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.25■□□□□ 0.51
TIMP1P01033 PRYP6-201ENST00000514804 343 ntBASIC18.25■□□□□ 0.51
TIMP1P01033 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.25■□□□□ 0.51
TIMP1P01033 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.25■□□□□ 0.51
TIMP1P01033 CYP2A7P1-201ENST00000595391 815 ntBASIC18.25■□□□□ 0.51
TIMP1P01033 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.25■□□□□ 0.51
TIMP1P01033 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.25■□□□□ 0.51
TIMP1P01033 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
TIMP1P01033 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIMP1P01033 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TIMP1P01033 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.24■□□□□ 0.51
TIMP1P01033 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TIMP1P01033 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TIMP1P01033 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TIMP1P01033 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 FAM220BP-201ENST00000377689 816 ntBASIC18.24■□□□□ 0.51
TIMP1P01033 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.24■□□□□ 0.51
TIMP1P01033 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 AC112492.5-201ENST00000421897 457 ntBASIC18.24■□□□□ 0.51
TIMP1P01033 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.24■□□□□ 0.51
TIMP1P01033 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.24■□□□□ 0.51
TIMP1P01033 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.24■□□□□ 0.51
TIMP1P01033 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TIMP1P01033 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIMP1P01033 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.23■□□□□ 0.51
TIMP1P01033 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.23■□□□□ 0.51
TIMP1P01033 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.23■□□□□ 0.51
TIMP1P01033 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.23■□□□□ 0.51
TIMP1P01033 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.23■□□□□ 0.51
TIMP1P01033 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TIMP1P01033 EGFEM1P-202ENST00000431685 1563 ntBASIC18.23■□□□□ 0.51
TIMP1P01033 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TIMP1P01033 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TIMP1P01033 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 MIR658-201ENST00000385210 100 ntBASIC18.23■□□□□ 0.51
TIMP1P01033 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.23■□□□□ 0.51
TIMP1P01033 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.23■□□□□ 0.51
TIMP1P01033 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TIMP1P01033 ZNF890P-202ENST00000530367 1156 ntBASIC18.23■□□□□ 0.51
TIMP1P01033 KRT17P8-201ENST00000540749 863 ntBASIC18.23■□□□□ 0.51
TIMP1P01033 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.23■□□□□ 0.51
TIMP1P01033 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.23■□□□□ 0.51
TIMP1P01033 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.23■□□□□ 0.51
TIMP1P01033 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
TIMP1P01033 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.23■□□□□ 0.51
TIMP1P01033 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.23■□□□□ 0.51
TIMP1P01033 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMP1P01033 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TIMP1P01033 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TIMP1P01033 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TIMP1P01033 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.22■□□□□ 0.51
TIMP1P01033 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TIMP1P01033 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMP1P01033 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.22■□□□□ 0.51
TIMP1P01033 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms