Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRIM3O75382 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRIM3O75382 AL031284.1-201ENST00000419297 478 ntBASIC15.99■□□□□ 0.15
TRIM3O75382 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.99■□□□□ 0.15
TRIM3O75382 HNRNPDP1-201ENST00000439535 754 ntBASIC15.99■□□□□ 0.15
TRIM3O75382 PRYP5-201ENST00000451909 266 ntBASIC15.99■□□□□ 0.15
TRIM3O75382 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM3O75382 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM3O75382 IGHV3-52-201ENST00000519770 353 ntBASIC15.99■□□□□ 0.15
TRIM3O75382 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.99■□□□□ 0.15
TRIM3O75382 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM3O75382 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM3O75382 AP001005.1-201ENST00000571755 1248 ntBASIC15.99■□□□□ 0.15
TRIM3O75382 STK25P1-201ENST00000585406 838 ntBASIC15.99■□□□□ 0.15
TRIM3O75382 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM3O75382 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM3O75382 AC025062.2-201ENST00000605477 670 ntBASIC15.99■□□□□ 0.15
TRIM3O75382 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM3O75382 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRIM3O75382 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM3O75382 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM3O75382 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM3O75382 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM3O75382 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.99■□□□□ 0.15
TRIM3O75382 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM3O75382 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRIM3O75382 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM3O75382 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM3O75382 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM3O75382 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM3O75382 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM3O75382 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRIM3O75382 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TRIM3O75382 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 AC003669.1-201ENST00000334569 611 ntBASIC15.98■□□□□ 0.15
TRIM3O75382 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRIM3O75382 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRIM3O75382 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM3O75382 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 AL020989.1-201ENST00000422979 469 ntBASIC15.98■□□□□ 0.15
TRIM3O75382 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
TRIM3O75382 BX005266.1-201ENST00000473402 457 ntBASIC15.98■□□□□ 0.15
TRIM3O75382 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM3O75382 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM3O75382 AP001094.4-201ENST00000579008 2176 ntBASIC15.98■□□□□ 0.15
TRIM3O75382 MTDHP4-201ENST00000600287 670 ntBASIC15.98■□□□□ 0.15
TRIM3O75382 AL138688.1-201ENST00000624851 1594 ntBASIC15.98■□□□□ 0.15
TRIM3O75382 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM3O75382 AL022326.1-202ENST00000641533 845 ntBASIC15.98■□□□□ 0.15
TRIM3O75382 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRIM3O75382 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRIM3O75382 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
TRIM3O75382 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TRIM3O75382 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM3O75382 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM3O75382 REXO1L11P-201ENST00000620964 1927 ntBASIC15.98■□□□□ 0.15
TRIM3O75382 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM3O75382 AL355312.1-201ENST00000407115 2176 ntBASIC15.97■□□□□ 0.15
TRIM3O75382 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM3O75382 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM3O75382 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRIM3O75382 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRIM3O75382 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 MYCLP1-201ENST00000372451 1075 ntBASIC15.97■□□□□ 0.15
TRIM3O75382 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM3O75382 KLF4P1-201ENST00000412782 1185 ntBASIC15.97■□□□□ 0.15
TRIM3O75382 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM3O75382 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM3O75382 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM3O75382 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM3O75382 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM3O75382 LINC01451-201ENST00000623792 534 ntBASIC15.97■□□□□ 0.15
TRIM3O75382 FAM215A-202ENST00000632077 792 ntBASIC15.97■□□□□ 0.15
TRIM3O75382 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms