Protein–RNA interactions for Protein: O60613

SELENOF, Selenoprotein F, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOFO60613 AC009533.2-201ENST00000543664 586 ntBASIC15.27■□□□□ 0.04
SELENOFO60613 AL136038.3-201ENST00000561909 1096 ntBASIC15.27■□□□□ 0.04
SELENOFO60613 AP005901.3-202ENST00000581653 237 ntBASIC15.27■□□□□ 0.04
SELENOFO60613 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SELENOFO60613 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.27■□□□□ 0.04
SELENOFO60613 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.27■□□□□ 0.04
SELENOFO60613 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.27■□□□□ 0.03
SELENOFO60613 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.27■□□□□ 0.03
SELENOFO60613 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.27■□□□□ 0.03
SELENOFO60613 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 PCDHB17P-201ENST00000539533 2393 ntBASIC15.27■□□□□ 0.03
SELENOFO60613 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SELENOFO60613 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SELENOFO60613 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SELENOFO60613 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SELENOFO60613 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.27■□□□□ 0.03
SELENOFO60613 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SELENOFO60613 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
SELENOFO60613 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SELENOFO60613 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.26■□□□□ 0.03
SELENOFO60613 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SELENOFO60613 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.26■□□□□ 0.03
SELENOFO60613 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.26■□□□□ 0.03
SELENOFO60613 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.26■□□□□ 0.03
SELENOFO60613 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.26■□□□□ 0.03
SELENOFO60613 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 AC003669.1-201ENST00000334569 611 ntBASIC15.26■□□□□ 0.03
SELENOFO60613 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SELENOFO60613 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 RCN1P1-201ENST00000400413 996 ntBASIC15.26■□□□□ 0.03
SELENOFO60613 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.26■□□□□ 0.03
SELENOFO60613 AC246785.2-201ENST00000432512 513 ntBASIC15.26■□□□□ 0.03
SELENOFO60613 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.26■□□□□ 0.03
SELENOFO60613 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SELENOFO60613 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.26■□□□□ 0.03
SELENOFO60613 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SELENOFO60613 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SELENOFO60613 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.26■□□□□ 0.03
SELENOFO60613 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.26■□□□□ 0.03
SELENOFO60613 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.26■□□□□ 0.03
SELENOFO60613 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.26■□□□□ 0.03
SELENOFO60613 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SELENOFO60613 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SELENOFO60613 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SELENOFO60613 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.25■□□□□ 0.03
SELENOFO60613 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.25■□□□□ 0.03
SELENOFO60613 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.25■□□□□ 0.03
SELENOFO60613 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SELENOFO60613 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 AC006449.5-201ENST00000610658 2098 ntBASIC15.25■□□□□ 0.03
SELENOFO60613 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.25■□□□□ 0.03
SELENOFO60613 VENTXP7-201ENST00000475503 772 ntBASIC15.25■□□□□ 0.03
SELENOFO60613 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.25■□□□□ 0.03
SELENOFO60613 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.25■□□□□ 0.03
SELENOFO60613 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.25■□□□□ 0.03
SELENOFO60613 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SELENOFO60613 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.25■□□□□ 0.03
SELENOFO60613 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms