Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LCMT2O60294 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LCMT2O60294 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.33■□□□□ 0.2
LCMT2O60294 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
LCMT2O60294 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.33■□□□□ 0.2
LCMT2O60294 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.33■□□□□ 0.2
LCMT2O60294 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.33■□□□□ 0.2
LCMT2O60294 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.33■□□□□ 0.2
LCMT2O60294 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.33■□□□□ 0.2
LCMT2O60294 AC004790.2-201ENST00000623588 572 ntBASIC16.33■□□□□ 0.2
LCMT2O60294 AF228730.7-201ENST00000641842 219 ntBASIC16.33■□□□□ 0.2
LCMT2O60294 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LCMT2O60294 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 IL9RP2-201ENST00000423948 1312 ntBASIC16.33■□□□□ 0.2
LCMT2O60294 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.33■□□□□ 0.2
LCMT2O60294 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LCMT2O60294 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LCMT2O60294 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.33■□□□□ 0.2
LCMT2O60294 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
LCMT2O60294 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LCMT2O60294 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCMT2O60294 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
LCMT2O60294 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.32■□□□□ 0.2
LCMT2O60294 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.32■□□□□ 0.2
LCMT2O60294 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 AL590627.1-203ENST00000421194 1026 ntBASIC16.32■□□□□ 0.2
LCMT2O60294 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LCMT2O60294 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 AC087163.2-201ENST00000457299 853 ntBASIC16.32■□□□□ 0.2
LCMT2O60294 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.32■□□□□ 0.2
LCMT2O60294 SLC25A6P2-201ENST00000497974 877 ntBASIC16.32■□□□□ 0.2
LCMT2O60294 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.32■□□□□ 0.2
LCMT2O60294 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.32■□□□□ 0.2
LCMT2O60294 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.32■□□□□ 0.2
LCMT2O60294 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.32■□□□□ 0.2
LCMT2O60294 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.32■□□□□ 0.2
LCMT2O60294 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 GGTLC5P-201ENST00000617623 998 ntBASIC16.32■□□□□ 0.2
LCMT2O60294 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.32■□□□□ 0.2
LCMT2O60294 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LCMT2O60294 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCMT2O60294 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
LCMT2O60294 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.32■□□□□ 0.2
LCMT2O60294 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.31■□□□□ 0.2
LCMT2O60294 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.31■□□□□ 0.2
LCMT2O60294 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
LCMT2O60294 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.31■□□□□ 0.2
LCMT2O60294 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.31■□□□□ 0.2
LCMT2O60294 AC005915.1-201ENST00000624912 2018 ntBASIC16.31■□□□□ 0.2
LCMT2O60294 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
LCMT2O60294 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.31■□□□□ 0.2
LCMT2O60294 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
LCMT2O60294 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.31■□□□□ 0.2
LCMT2O60294 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.31■□□□□ 0.2
LCMT2O60294 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.31■□□□□ 0.2
LCMT2O60294 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.31■□□□□ 0.2
LCMT2O60294 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.31■□□□□ 0.2
LCMT2O60294 AC108073.2-201ENST00000464002 357 ntBASIC16.31■□□□□ 0.2
LCMT2O60294 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCMT2O60294 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.31■□□□□ 0.2
LCMT2O60294 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LCMT2O60294 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms