Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.99□□□□□ -0.17
SSSCA1O60232 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SSSCA1O60232 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.99□□□□□ -0.17
SSSCA1O60232 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.99□□□□□ -0.17
SSSCA1O60232 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.99□□□□□ -0.17
SSSCA1O60232 AC067930.6-201ENST00000623257 4947 ntBASIC13.98□□□□□ -0.17
SSSCA1O60232 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.98□□□□□ -0.17
SSSCA1O60232 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.98□□□□□ -0.17
SSSCA1O60232 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SSSCA1O60232 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SSSCA1O60232 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
SSSCA1O60232 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 HLA-A-202ENST00000376806 1854 ntBASIC13.98□□□□□ -0.17
SSSCA1O60232 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.98□□□□□ -0.17
SSSCA1O60232 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.98□□□□□ -0.17
SSSCA1O60232 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 MYCLP1-201ENST00000372451 1075 ntBASIC13.98□□□□□ -0.17
SSSCA1O60232 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.98□□□□□ -0.17
SSSCA1O60232 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 MIR1238-201ENST00000408483 83 ntBASIC13.98□□□□□ -0.17
SSSCA1O60232 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.98□□□□□ -0.17
SSSCA1O60232 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.98□□□□□ -0.17
SSSCA1O60232 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.98□□□□□ -0.17
SSSCA1O60232 AC092666.2-201ENST00000613287 246 ntBASIC13.98□□□□□ -0.17
SSSCA1O60232 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SSSCA1O60232 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSSCA1O60232 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSSCA1O60232 AL513477.1-201ENST00000602865 2407 ntBASIC13.98□□□□□ -0.17
SSSCA1O60232 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.97□□□□□ -0.17
SSSCA1O60232 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.97□□□□□ -0.17
SSSCA1O60232 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SSSCA1O60232 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 EGFEM1P-202ENST00000431685 1563 ntBASIC13.97□□□□□ -0.17
SSSCA1O60232 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.97□□□□□ -0.17
SSSCA1O60232 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.97□□□□□ -0.17
SSSCA1O60232 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.97□□□□□ -0.17
SSSCA1O60232 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SSSCA1O60232 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 CD99P1-205ENST00000527459 561 ntBASIC13.97□□□□□ -0.17
SSSCA1O60232 AL512604.3-201ENST00000569583 964 ntBASIC13.97□□□□□ -0.17
SSSCA1O60232 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.97□□□□□ -0.17
SSSCA1O60232 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.97□□□□□ -0.17
SSSCA1O60232 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SSSCA1O60232 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSSCA1O60232 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.97□□□□□ -0.17
SSSCA1O60232 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.97□□□□□ -0.17
SSSCA1O60232 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms