Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC129492.6-201ENST00000611383 1305 ntBASIC18.49■□□□□ 0.55
EXTL3O43909 KRT8P49-201ENST00000604166 1432 ntBASIC18.49■□□□□ 0.55
EXTL3O43909 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
EXTL3O43909 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.49■□□□□ 0.55
EXTL3O43909 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.49■□□□□ 0.55
EXTL3O43909 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.49■□□□□ 0.55
EXTL3O43909 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.49■□□□□ 0.55
EXTL3O43909 CRYGEP-201ENST00000412192 528 ntBASIC18.49■□□□□ 0.55
EXTL3O43909 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
EXTL3O43909 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.49■□□□□ 0.55
EXTL3O43909 AC107918.2-201ENST00000530817 355 ntBASIC18.49■□□□□ 0.55
EXTL3O43909 AC092865.5-201ENST00000545435 363 ntBASIC18.49■□□□□ 0.55
EXTL3O43909 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.49■□□□□ 0.55
EXTL3O43909 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.49■□□□□ 0.55
EXTL3O43909 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.49■□□□□ 0.55
EXTL3O43909 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 AL121761.2-201ENST00000598007 1648 ntBASIC18.49■□□□□ 0.55
EXTL3O43909 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.49■□□□□ 0.55
EXTL3O43909 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.49■□□□□ 0.55
EXTL3O43909 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EXTL3O43909 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.48■□□□□ 0.55
EXTL3O43909 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
EXTL3O43909 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
EXTL3O43909 TOP3BP1-201ENST00000420768 1380 ntBASIC18.48■□□□□ 0.55
EXTL3O43909 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
EXTL3O43909 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.48■□□□□ 0.55
EXTL3O43909 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.48■□□□□ 0.55
EXTL3O43909 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.48■□□□□ 0.55
EXTL3O43909 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
EXTL3O43909 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
EXTL3O43909 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
EXTL3O43909 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.48■□□□□ 0.55
EXTL3O43909 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
EXTL3O43909 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EXTL3O43909 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
EXTL3O43909 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.47■□□□□ 0.55
EXTL3O43909 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
EXTL3O43909 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.47■□□□□ 0.55
EXTL3O43909 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.47■□□□□ 0.55
EXTL3O43909 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.47■□□□□ 0.55
EXTL3O43909 HCG4B-203ENST00000450128 991 ntBASIC18.47■□□□□ 0.55
EXTL3O43909 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.47■□□□□ 0.55
EXTL3O43909 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.47■□□□□ 0.55
EXTL3O43909 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
EXTL3O43909 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
EXTL3O43909 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.47■□□□□ 0.55
EXTL3O43909 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.47■□□□□ 0.55
EXTL3O43909 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.47■□□□□ 0.55
EXTL3O43909 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXTL3O43909 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.46■□□□□ 0.55
EXTL3O43909 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXTL3O43909 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.46■□□□□ 0.55
EXTL3O43909 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXTL3O43909 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXTL3O43909 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXTL3O43909 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXTL3O43909 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EXTL3O43909 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms