Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.61■□□□□ 0.73
PRPF3O43395 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.61■□□□□ 0.73
PRPF3O43395 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 AL645728.1-201ENST00000366221 2101 ntBASIC19.61■□□□□ 0.73
PRPF3O43395 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PRPF3O43395 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.61■□□□□ 0.73
PRPF3O43395 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.6■□□□□ 0.73
PRPF3O43395 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPF3O43395 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PRPF3O43395 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PRPF3O43395 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.6■□□□□ 0.73
PRPF3O43395 RPL13AP23-201ENST00000480739 586 ntBASIC19.6■□□□□ 0.73
PRPF3O43395 AC034105.1-201ENST00000563488 319 ntBASIC19.6■□□□□ 0.73
PRPF3O43395 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPF3O43395 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.6■□□□□ 0.73
PRPF3O43395 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
PRPF3O43395 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPF3O43395 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PRPF3O43395 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PRPF3O43395 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PRPF3O43395 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF3O43395 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.6■□□□□ 0.73
PRPF3O43395 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.59■□□□□ 0.73
PRPF3O43395 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PRPF3O43395 LINC00895-201ENST00000629028 1637 ntBASIC19.59■□□□□ 0.73
PRPF3O43395 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PRPF3O43395 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.59■□□□□ 0.73
PRPF3O43395 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 VN2R19P-201ENST00000442399 1052 ntBASIC19.59■□□□□ 0.73
PRPF3O43395 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPF3O43395 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.59■□□□□ 0.73
PRPF3O43395 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.59■□□□□ 0.73
PRPF3O43395 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PRPF3O43395 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.59■□□□□ 0.73
PRPF3O43395 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPF3O43395 AP002490.2-201ENST00000524791 560 ntBASIC19.59■□□□□ 0.73
PRPF3O43395 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPF3O43395 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPF3O43395 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.59■□□□□ 0.73
PRPF3O43395 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPF3O43395 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.59■□□□□ 0.73
PRPF3O43395 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.59■□□□□ 0.73
PRPF3O43395 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PRPF3O43395 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPF3O43395 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 AC078925.2-201ENST00000624013 1973 ntBASIC19.59■□□□□ 0.73
PRPF3O43395 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPF3O43395 AC104109.2-201ENST00000602919 1418 ntBASIC19.59■□□□□ 0.73
PRPF3O43395 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF3O43395 RNF216P1-203ENST00000404404 2427 ntBASIC19.59■□□□□ 0.73
PRPF3O43395 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPF3O43395 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.58■□□□□ 0.72
PRPF3O43395 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.58■□□□□ 0.72
PRPF3O43395 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF3O43395 MIR4751-201ENST00000578027 74 ntBASIC19.58■□□□□ 0.72
PRPF3O43395 MPDU1-223ENST00000582151 728 ntBASIC19.58■□□□□ 0.72
PRPF3O43395 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.58■□□□□ 0.72
PRPF3O43395 AC013467.2-201ENST00000605472 835 ntBASIC19.58■□□□□ 0.72
PRPF3O43395 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms