Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.17■□□□□ 0.5
HOXA2O43364 COX20P2-201ENST00000452636 358 ntBASIC18.17■□□□□ 0.5
HOXA2O43364 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.17■□□□□ 0.5
HOXA2O43364 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXA2O43364 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA2O43364 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HOXA2O43364 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA2O43364 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA2O43364 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXA2O43364 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HOXA2O43364 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA2O43364 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA2O43364 AC131009.4-201ENST00000624048 1740 ntBASIC18.17■□□□□ 0.5
HOXA2O43364 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA2O43364 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA2O43364 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA2O43364 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
HOXA2O43364 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA2O43364 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXA2O43364 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXA2O43364 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXA2O43364 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXA2O43364 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXA2O43364 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXA2O43364 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXA2O43364 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXA2O43364 SPDYE14P-201ENST00000442619 822 ntBASIC18.16■□□□□ 0.5
HOXA2O43364 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXA2O43364 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXA2O43364 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXA2O43364 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXA2O43364 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXA2O43364 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXA2O43364 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HOXA2O43364 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXA2O43364 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXA2O43364 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXA2O43364 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.16■□□□□ 0.5
HOXA2O43364 KRT8P49-201ENST00000604166 1432 ntBASIC18.15■□□□□ 0.5
HOXA2O43364 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HOXA2O43364 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXA2O43364 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXA2O43364 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HOXA2O43364 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.15■□□□□ 0.5
HOXA2O43364 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HOXA2O43364 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXA2O43364 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.15■□□□□ 0.5
HOXA2O43364 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXA2O43364 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 SLC25A39P2-201ENST00000537614 270 ntBASIC18.15■□□□□ 0.5
HOXA2O43364 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXA2O43364 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.15■□□□□ 0.5
HOXA2O43364 AP000842.3-202ENST00000569238 1080 ntBASIC18.15■□□□□ 0.5
HOXA2O43364 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.15■□□□□ 0.5
HOXA2O43364 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 AC027307.2-201ENST00000591252 911 ntBASIC18.15■□□□□ 0.5
HOXA2O43364 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.15■□□□□ 0.5
HOXA2O43364 AC021097.1-201ENST00000607902 574 ntBASIC18.15■□□□□ 0.5
HOXA2O43364 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXA2O43364 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
HOXA2O43364 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXA2O43364 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HOXA2O43364 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXA2O43364 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HOXA2O43364 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HOXA2O43364 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.14■□□□□ 0.5
HOXA2O43364 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
HOXA2O43364 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
HOXA2O43364 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HOXA2O43364 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXA2O43364 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXA2O43364 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.14■□□□□ 0.49
HOXA2O43364 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXA2O43364 AL138688.1-201ENST00000624851 1594 ntBASIC18.14■□□□□ 0.49
HOXA2O43364 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXA2O43364 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXA2O43364 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HOXA2O43364 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXA2O43364 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.14■□□□□ 0.49
HOXA2O43364 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXA2O43364 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
HOXA2O43364 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.14■□□□□ 0.49
HOXA2O43364 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.14■□□□□ 0.49
HOXA2O43364 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.14■□□□□ 0.49
HOXA2O43364 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
HOXA2O43364 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.14■□□□□ 0.49
HOXA2O43364 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.14■□□□□ 0.49
HOXA2O43364 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.14■□□□□ 0.49
HOXA2O43364 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.14■□□□□ 0.49
HOXA2O43364 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms