Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.38■□□□□ 0.37
RIPK2O43353 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RIPK2O43353 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RIPK2O43353 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RIPK2O43353 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.37■□□□□ 0.37
RIPK2O43353 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.37■□□□□ 0.37
RIPK2O43353 STK19B-204ENST00000512515 211 ntBASIC17.37■□□□□ 0.37
RIPK2O43353 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.37■□□□□ 0.37
RIPK2O43353 AC010203.1-204ENST00000548782 407 ntBASIC17.37■□□□□ 0.37
RIPK2O43353 AL138831.2-201ENST00000606564 490 ntBASIC17.37■□□□□ 0.37
RIPK2O43353 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RIPK2O43353 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RIPK2O43353 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPK2O43353 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.37■□□□□ 0.37
RIPK2O43353 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.37■□□□□ 0.37
RIPK2O43353 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.36■□□□□ 0.37
RIPK2O43353 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.36■□□□□ 0.37
RIPK2O43353 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.36■□□□□ 0.37
RIPK2O43353 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
RIPK2O43353 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.36■□□□□ 0.37
RIPK2O43353 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 VENTXP5-201ENST00000523979 775 ntBASIC17.36■□□□□ 0.37
RIPK2O43353 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 AC145285.6-201ENST00000604632 637 ntBASIC17.36■□□□□ 0.37
RIPK2O43353 AP006294.2-201ENST00000641667 209 ntBASIC17.36■□□□□ 0.37
RIPK2O43353 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPK2O43353 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RIPK2O43353 AC005052.1-201ENST00000625181 2492 ntBASIC17.36■□□□□ 0.37
RIPK2O43353 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.36■□□□□ 0.37
RIPK2O43353 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.35■□□□□ 0.37
RIPK2O43353 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
RIPK2O43353 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms