Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.16■□□□□ 0.98
SRGAP3O43295 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.16■□□□□ 0.98
SRGAP3O43295 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.16■□□□□ 0.98
SRGAP3O43295 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SRGAP3O43295 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.15■□□□□ 0.98
SRGAP3O43295 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.15■□□□□ 0.98
SRGAP3O43295 CXCL1P1-201ENST00000502804 216 ntBASIC21.15■□□□□ 0.98
SRGAP3O43295 RNA5SP416-201ENST00000516838 111 ntBASIC21.15■□□□□ 0.98
SRGAP3O43295 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.15■□□□□ 0.98
SRGAP3O43295 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.15■□□□□ 0.98
SRGAP3O43295 AC018845.2-201ENST00000568326 409 ntBASIC21.15■□□□□ 0.98
SRGAP3O43295 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.15■□□□□ 0.98
SRGAP3O43295 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.15■□□□□ 0.98
SRGAP3O43295 ACTL9-202ENST00000612068 1252 ntBASIC21.15■□□□□ 0.98
SRGAP3O43295 AC010507.1-201ENST00000633895 436 ntBASIC21.15■□□□□ 0.98
SRGAP3O43295 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SRGAP3O43295 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SRGAP3O43295 OR6D1P-202ENST00000641007 5290 ntBASIC21.15■□□□□ 0.98
SRGAP3O43295 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP3O43295 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SRGAP3O43295 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SRGAP3O43295 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRGAP3O43295 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.14■□□□□ 0.98
SRGAP3O43295 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SRGAP3O43295 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SRGAP3O43295 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRGAP3O43295 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRGAP3O43295 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP3O43295 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP3O43295 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP3O43295 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SRGAP3O43295 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.14■□□□□ 0.97
SRGAP3O43295 FAM185BP-201ENST00000443595 716 ntBASIC21.14■□□□□ 0.97
SRGAP3O43295 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.14■□□□□ 0.97
SRGAP3O43295 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
SRGAP3O43295 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.14■□□□□ 0.97
SRGAP3O43295 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP3O43295 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP3O43295 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP3O43295 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SRGAP3O43295 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP3O43295 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP3O43295 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP3O43295 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SRGAP3O43295 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SRGAP3O43295 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.13■□□□□ 0.97
SRGAP3O43295 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SRGAP3O43295 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.13■□□□□ 0.97
SRGAP3O43295 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 PGAM5P1-201ENST00000518923 814 ntBASIC21.13■□□□□ 0.97
SRGAP3O43295 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.13■□□□□ 0.97
SRGAP3O43295 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.13■□□□□ 0.97
SRGAP3O43295 AC096734.2-201ENST00000562054 433 ntBASIC21.13■□□□□ 0.97
SRGAP3O43295 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.13■□□□□ 0.97
SRGAP3O43295 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SRGAP3O43295 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SRGAP3O43295 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP3O43295 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.13■□□□□ 0.97
SRGAP3O43295 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.12■□□□□ 0.97
SRGAP3O43295 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SRGAP3O43295 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.12■□□□□ 0.97
SRGAP3O43295 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms