Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN3O15551 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN3O15551 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLDN3O15551 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN3O15551 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN3O15551 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CLDN3O15551 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLDN3O15551 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.65■□□□□ 0.58
CLDN3O15551 KRT18P3-201ENST00000451602 1288 ntBASIC18.65■□□□□ 0.58
CLDN3O15551 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.65■□□□□ 0.58
CLDN3O15551 OR7E47P-204ENST00000575924 449 ntBASIC18.65■□□□□ 0.58
CLDN3O15551 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN3O15551 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLDN3O15551 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLDN3O15551 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN3O15551 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN3O15551 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN3O15551 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN3O15551 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN3O15551 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN3O15551 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN3O15551 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.64■□□□□ 0.58
CLDN3O15551 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN3O15551 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.64■□□□□ 0.58
CLDN3O15551 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN3O15551 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN3O15551 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN3O15551 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CLDN3O15551 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 POLD2P1-201ENST00000511220 997 ntBASIC18.64■□□□□ 0.57
CLDN3O15551 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.64■□□□□ 0.57
CLDN3O15551 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 AC064836.3-201ENST00000607928 673 ntBASIC18.64■□□□□ 0.57
CLDN3O15551 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN3O15551 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLDN3O15551 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 AC099398.1-201ENST00000567919 2776 ntBASIC18.64■□□□□ 0.57
CLDN3O15551 AP001094.4-201ENST00000579008 2176 ntBASIC18.64■□□□□ 0.57
CLDN3O15551 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN3O15551 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.63■□□□□ 0.57
CLDN3O15551 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN3O15551 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN3O15551 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN3O15551 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.63■□□□□ 0.57
CLDN3O15551 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN3O15551 RNA5SP416-201ENST00000516838 111 ntBASIC18.63■□□□□ 0.57
CLDN3O15551 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.63■□□□□ 0.57
CLDN3O15551 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN3O15551 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN3O15551 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN3O15551 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CLDN3O15551 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN3O15551 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN3O15551 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLDN3O15551 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
CLDN3O15551 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN3O15551 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLDN3O15551 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms