Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CHD1O14646 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC27.13■■□□□ 1.93
CHD1O14646 COG4-212ENST00000564653 590 ntTSL 5 BASIC27.13■■□□□ 1.93
CHD1O14646 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC27.13■■□□□ 1.93
CHD1O14646 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC27.13■■□□□ 1.93
CHD1O14646 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CHD1O14646 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CHD1O14646 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CHD1O14646 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC27.13■■□□□ 1.93
CHD1O14646 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CHD1O14646 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC27.13■■□□□ 1.93
CHD1O14646 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CHD1O14646 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CHD1O14646 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CHD1O14646 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CHD1O14646 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CHD1O14646 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CHD1O14646 GPAA1P2-201ENST00000417923 928 ntBASIC27.13■■□□□ 1.93
CHD1O14646 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC27.13■■□□□ 1.93
CHD1O14646 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC27.13■■□□□ 1.93
CHD1O14646 AC009542.2-202ENST00000619004 1067 ntBASIC27.13■■□□□ 1.93
CHD1O14646 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC27.13■■□□□ 1.93
CHD1O14646 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHD1O14646 CROCCP3-202ENST00000420820 1947 ntBASIC27.12■■□□□ 1.93
CHD1O14646 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHD1O14646 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CHD1O14646 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC27.12■■□□□ 1.93
CHD1O14646 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHD1O14646 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
CHD1O14646 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC27.12■■□□□ 1.93
CHD1O14646 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC27.12■■□□□ 1.93
CHD1O14646 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHD1O14646 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC27.12■■□□□ 1.93
CHD1O14646 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC27.12■■□□□ 1.93
CHD1O14646 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC27.11■■□□□ 1.93
CHD1O14646 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHD1O14646 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CHD1O14646 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHD1O14646 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHD1O14646 KLF2P4-201ENST00000451959 1225 ntBASIC27.11■■□□□ 1.93
CHD1O14646 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC27.11■■□□□ 1.93
CHD1O14646 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC27.11■■□□□ 1.93
CHD1O14646 AP001350.2-201ENST00000625104 1094 ntBASIC27.11■■□□□ 1.93
CHD1O14646 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC27.11■■□□□ 1.93
CHD1O14646 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC27.11■■□□□ 1.93
CHD1O14646 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC27.11■■□□□ 1.93
CHD1O14646 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHD1O14646 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC27.11■■□□□ 1.93
CHD1O14646 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHD1O14646 AC116562.4-201ENST00000641316 2276 ntBASIC27.11■■□□□ 1.93
CHD1O14646 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CHD1O14646 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHD1O14646 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHD1O14646 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CHD1O14646 LBX2-201ENST00000341396 886 ntTSL 3 BASIC27.1■■□□□ 1.93
CHD1O14646 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CHD1O14646 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
CHD1O14646 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CHD1O14646 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC27.1■■□□□ 1.93
CHD1O14646 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC27.1■■□□□ 1.93
CHD1O14646 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CHD1O14646 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC27.1■■□□□ 1.93
CHD1O14646 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
CHD1O14646 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC27.1■■□□□ 1.93
CHD1O14646 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CHD1O14646 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CHD1O14646 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHD1O14646 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC27.1■■□□□ 1.93
CHD1O14646 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHD1O14646 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHD1O14646 FXNP2-201ENST00000411625 547 ntBASIC27.1■■□□□ 1.93
CHD1O14646 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC27.1■■□□□ 1.93
CHD1O14646 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC27.1■■□□□ 1.93
CHD1O14646 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC27.1■■□□□ 1.93
CHD1O14646 REXO1L9P-201ENST00000604264 2108 ntBASIC27.1■■□□□ 1.93
CHD1O14646 AL033527.5-201ENST00000641382 801 ntBASIC27.1■■□□□ 1.93
CHD1O14646 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
CHD1O14646 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHD1O14646 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
CHD1O14646 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHD1O14646 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHD1O14646 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC27.09■■□□□ 1.93
CHD1O14646 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHD1O14646 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHD1O14646 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHD1O14646 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHD1O14646 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHD1O14646 AC007551.1-201ENST00000457394 519 ntBASIC27.09■■□□□ 1.93
CHD1O14646 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC27.09■■□□□ 1.93
CHD1O14646 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CHD1O14646 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC27.09■■□□□ 1.93
CHD1O14646 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHD1O14646 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC27.08■■□□□ 1.93
CHD1O14646 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHD1O14646 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC27.08■■□□□ 1.93
CHD1O14646 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC27.08■■□□□ 1.93
CHD1O14646 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHD1O14646 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CHD1O14646 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC27.08■■□□□ 1.93
CHD1O14646 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms