Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK2O00526 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK2O00526 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK2O00526 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK2O00526 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK2O00526 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 AC148477.5-201ENST00000625164 1645 ntBASIC13.72□□□□□ -0.21
UPK2O00526 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
UPK2O00526 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK2O00526 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.72□□□□□ -0.21
UPK2O00526 SPDYE21P-201ENST00000413323 827 ntBASIC13.72□□□□□ -0.21
UPK2O00526 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.72□□□□□ -0.21
UPK2O00526 AC104819.1-201ENST00000504587 486 ntBASIC13.72□□□□□ -0.21
UPK2O00526 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.72□□□□□ -0.21
UPK2O00526 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 AC092329.2-201ENST00000598402 547 ntBASIC13.72□□□□□ -0.21
UPK2O00526 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.72□□□□□ -0.21
UPK2O00526 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK2O00526 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK2O00526 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UPK2O00526 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
UPK2O00526 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK2O00526 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK2O00526 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
UPK2O00526 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
UPK2O00526 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK2O00526 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
UPK2O00526 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK2O00526 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.71□□□□□ -0.21
UPK2O00526 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK2O00526 AP000867.3-201ENST00000524675 377 ntBASIC13.71□□□□□ -0.21
UPK2O00526 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.71□□□□□ -0.21
UPK2O00526 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.71□□□□□ -0.21
UPK2O00526 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.71□□□□□ -0.21
UPK2O00526 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
UPK2O00526 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
UPK2O00526 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK2O00526 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK2O00526 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UPK2O00526 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UPK2O00526 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.71□□□□□ -0.22
UPK2O00526 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK2O00526 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK2O00526 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK2O00526 AC097637.2-201ENST00000624096 1997 ntBASIC13.71□□□□□ -0.22
UPK2O00526 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms