Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TLR4O00206 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.92■□□□□ 0.3
TLR4O00206 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.92■□□□□ 0.3
TLR4O00206 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.92■□□□□ 0.3
TLR4O00206 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.92■□□□□ 0.3
TLR4O00206 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TLR4O00206 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.92■□□□□ 0.3
TLR4O00206 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.92■□□□□ 0.3
TLR4O00206 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.92■□□□□ 0.3
TLR4O00206 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.92■□□□□ 0.3
TLR4O00206 AL513210.1-201ENST00000629608 234 ntBASIC16.92■□□□□ 0.3
TLR4O00206 AC105339.1-204ENST00000636249 355 ntBASIC16.92■□□□□ 0.3
TLR4O00206 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.92■□□□□ 0.3
TLR4O00206 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.92■□□□□ 0.3
TLR4O00206 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TLR4O00206 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.92■□□□□ 0.3
TLR4O00206 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TLR4O00206 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TLR4O00206 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.92■□□□□ 0.3
TLR4O00206 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR4O00206 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TLR4O00206 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TLR4O00206 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.91■□□□□ 0.3
TLR4O00206 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TLR4O00206 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
TLR4O00206 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TLR4O00206 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.91■□□□□ 0.3
TLR4O00206 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.91■□□□□ 0.3
TLR4O00206 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 TSEN15P1-201ENST00000423257 515 ntBASIC16.91■□□□□ 0.3
TLR4O00206 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.91■□□□□ 0.3
TLR4O00206 AC087163.2-201ENST00000457299 853 ntBASIC16.91■□□□□ 0.3
TLR4O00206 SLC25A6P2-201ENST00000497974 877 ntBASIC16.91■□□□□ 0.3
TLR4O00206 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.91■□□□□ 0.3
TLR4O00206 AC106028.4-201ENST00000614509 607 ntBASIC16.91■□□□□ 0.3
TLR4O00206 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.91■□□□□ 0.3
TLR4O00206 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.91■□□□□ 0.3
TLR4O00206 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.91■□□□□ 0.3
TLR4O00206 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR4O00206 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
TLR4O00206 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TLR4O00206 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.9■□□□□ 0.3
TLR4O00206 AC006116.8-202ENST00000587620 1550 ntBASIC16.9■□□□□ 0.3
TLR4O00206 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 AL121761.2-201ENST00000598007 1648 ntBASIC16.9■□□□□ 0.3
TLR4O00206 AC092919.2-201ENST00000623631 1645 ntBASIC16.9■□□□□ 0.3
TLR4O00206 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.9■□□□□ 0.3
TLR4O00206 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.9■□□□□ 0.3
TLR4O00206 AC004461.1-201ENST00000412461 403 ntBASIC16.9■□□□□ 0.3
TLR4O00206 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.9■□□□□ 0.3
TLR4O00206 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 AC112191.1-201ENST00000523689 701 ntBASIC16.9■□□□□ 0.3
TLR4O00206 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.9■□□□□ 0.3
TLR4O00206 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.9■□□□□ 0.3
TLR4O00206 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.9■□□□□ 0.3
TLR4O00206 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TLR4O00206 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR4O00206 AC139713.2-201ENST00000641328 2723 ntBASIC16.9■□□□□ 0.3
TLR4O00206 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms