Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.56■□□□□ 0.56
ARVCFO00192 AC131009.4-201ENST00000624048 1740 ntBASIC18.56■□□□□ 0.56
ARVCFO00192 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARVCFO00192 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARVCFO00192 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARVCFO00192 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARVCFO00192 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.56■□□□□ 0.56
ARVCFO00192 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.56■□□□□ 0.56
ARVCFO00192 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARVCFO00192 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.56■□□□□ 0.56
ARVCFO00192 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ARVCFO00192 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.55■□□□□ 0.56
ARVCFO00192 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ARVCFO00192 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.55■□□□□ 0.56
ARVCFO00192 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ARVCFO00192 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ARVCFO00192 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.55■□□□□ 0.56
ARVCFO00192 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.55■□□□□ 0.56
ARVCFO00192 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.55■□□□□ 0.56
ARVCFO00192 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.55■□□□□ 0.56
ARVCFO00192 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.55■□□□□ 0.56
ARVCFO00192 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.55■□□□□ 0.56
ARVCFO00192 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.55■□□□□ 0.56
ARVCFO00192 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.55■□□□□ 0.56
ARVCFO00192 MPDU1-223ENST00000582151 728 ntBASIC18.55■□□□□ 0.56
ARVCFO00192 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.55■□□□□ 0.56
ARVCFO00192 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ARVCFO00192 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARVCFO00192 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ARVCFO00192 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ARVCFO00192 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.54■□□□□ 0.56
ARVCFO00192 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.54■□□□□ 0.56
ARVCFO00192 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.54■□□□□ 0.56
ARVCFO00192 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.54■□□□□ 0.56
ARVCFO00192 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.54■□□□□ 0.56
ARVCFO00192 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.54■□□□□ 0.56
ARVCFO00192 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.54■□□□□ 0.56
ARVCFO00192 HLA-V-204ENST00000476601 1289 ntBASIC18.54■□□□□ 0.56
ARVCFO00192 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.54■□□□□ 0.56
ARVCFO00192 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.54■□□□□ 0.56
ARVCFO00192 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.54■□□□□ 0.56
ARVCFO00192 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.54■□□□□ 0.56
ARVCFO00192 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.54■□□□□ 0.56
ARVCFO00192 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.54■□□□□ 0.56
ARVCFO00192 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.54■□□□□ 0.56
ARVCFO00192 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.54■□□□□ 0.56
ARVCFO00192 AC073389.1-201ENST00000595595 795 ntBASIC18.54■□□□□ 0.56
ARVCFO00192 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.54■□□□□ 0.56
ARVCFO00192 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 EGFEM1P-202ENST00000431685 1563 ntBASIC18.54■□□□□ 0.56
ARVCFO00192 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.54■□□□□ 0.56
ARVCFO00192 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.54■□□□□ 0.56
ARVCFO00192 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ARVCFO00192 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ARVCFO00192 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARVCFO00192 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ARVCFO00192 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
ARVCFO00192 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ARVCFO00192 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.53■□□□□ 0.56
ARVCFO00192 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ARVCFO00192 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.53■□□□□ 0.56
ARVCFO00192 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.53■□□□□ 0.56
ARVCFO00192 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARVCFO00192 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
ARVCFO00192 AC021097.1-201ENST00000607902 574 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms