Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 HLA-A-202ENST00000376806 1854 ntBASIC14.65□□□□□ -0.06
TMEM235A6NFC5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 AC097374.2-201ENST00000618617 1306 ntBASIC14.65□□□□□ -0.06
TMEM235A6NFC5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM235A6NFC5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.64□□□□□ -0.07
TMEM235A6NFC5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 ZNF444P1-201ENST00000559497 298 ntBASIC14.64□□□□□ -0.07
TMEM235A6NFC5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 AC022188.1-201ENST00000620960 1664 ntBASIC14.64□□□□□ -0.07
TMEM235A6NFC5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM235A6NFC5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 FAM8A6P-201ENST00000407496 1135 ntBASIC14.63□□□□□ -0.07
TMEM235A6NFC5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 SPDYE15P-201ENST00000424157 909 ntBASIC14.63□□□□□ -0.07
TMEM235A6NFC5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 GPR32P1-201ENST00000601788 811 ntBASIC14.63□□□□□ -0.07
TMEM235A6NFC5 AC140113.3-201ENST00000605663 199 ntBASIC14.63□□□□□ -0.07
TMEM235A6NFC5 AL138966.2-201ENST00000621997 464 ntBASIC14.63□□□□□ -0.07
TMEM235A6NFC5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms