Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TBC1D3FA6NER0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 AC004461.1-201ENST00000412461 403 ntBASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 AL645939.2-201ENST00000427340 991 ntBASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 AC140658.5-201ENST00000438532 169 ntBASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 AC027612.4-201ENST00000605371 583 ntBASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 AL513210.1-201ENST00000629608 234 ntBASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TBC1D3FA6NER0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TBC1D3FA6NER0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.96■□□□□ 0.3
TBC1D3FA6NER0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.96■□□□□ 0.3
TBC1D3FA6NER0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TBC1D3FA6NER0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TBC1D3FA6NER0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.96■□□□□ 0.3
TBC1D3FA6NER0 AC016396.2-201ENST00000562575 1417 ntBASIC16.96■□□□□ 0.3
TBC1D3FA6NER0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TBC1D3FA6NER0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 OR6D1P-203ENST00000641209 4860 ntBASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 TSEN15P1-201ENST00000423257 515 ntBASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 AL671277.1-201ENST00000429656 993 ntBASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 AC004449.1-201ENST00000564240 433 ntBASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 AC005412.3-201ENST00000580309 715 ntBASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 AL121761.2-201ENST00000598007 1648 ntBASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms