Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.57■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC092910.1-201ENST00000482027 1129 ntBASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC023511.2-201ENST00000618803 211 ntBASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC092053.1-201ENST00000605787 1936 ntBASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 FRMD8P1-201ENST00000440433 1524 ntBASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 KRT18P27-201ENST00000427733 1299 ntBASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC098831.1-202ENST00000438821 336 ntBASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 KRT18P58-201ENST00000527480 1120 ntBASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC105339.3-201ENST00000560043 636 ntBASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC145285.3-201ENST00000564603 959 ntBASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFSF12-TNFSF13A0A0A6YY99 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms