Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC104076.2-201ENST00000448912 469 ntBASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 AL671277.2-201ENST00000458060 996 ntBASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 AL662844.4-201ENST00000606367 2838 ntBASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV6-7A0A0A0MS04 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC092384.3-202ENST00000564646 2873 ntBASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 IGHV3-41-201ENST00000613121 348 ntBASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 AL135999.2-201ENST00000622438 1686 ntBASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-7A0A0A0MS04 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC023824.1-201ENST00000562945 2975 ntBASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC009336.1-201ENST00000608941 1553 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms