Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGB3Q9Y5G1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 UNC93B7-201ENST00000509439 705 ntBASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB3Q9Y5G1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 AC011467.2-201ENST00000598425 242 ntBASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 AC099336.1-202ENST00000602961 463 ntBASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 AC019129.2-201ENST00000609837 1235 ntBASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 NSUN5P1-202ENST00000421140 1535 ntBASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 NSUN5P2-203ENST00000457352 1529 ntBASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB3Q9Y5G1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGB3Q9Y5G1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms