Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 AC060834.1-201ENST00000443027 2032 ntBASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 LYSMD4-203ENST00000378904 2122 ntBASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.66■□□□□ 0.74
R3HCC1Q9Y3T6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 AC011498.5-201ENST00000592027 486 ntBASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 AC133963.1-201ENST00000504166 1679 ntBASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.65■□□□□ 0.74
R3HCC1Q9Y3T6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
R3HCC1Q9Y3T6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
R3HCC1Q9Y3T6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.64■□□□□ 0.74
R3HCC1Q9Y3T6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
R3HCC1Q9Y3T6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
R3HCC1Q9Y3T6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 BX276092.5-203ENST00000456199 560 ntBASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms