Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 ARSEP1-201ENST00000420443 635 ntBASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 MPDU1-223ENST00000582151 728 ntBASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 AC073389.1-201ENST00000595595 795 ntBASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.34■■□□□ 1.01
RTCBQ9Y3I0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 AC009477.1-201ENST00000452936 217 ntBASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 TP53TG3HP-202ENST00000569755 579 ntBASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.33■■□□□ 1.01
RTCBQ9Y3I0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.33■■□□□ 1
RTCBQ9Y3I0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RTCBQ9Y3I0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.33■■□□□ 1
RTCBQ9Y3I0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTCBQ9Y3I0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTCBQ9Y3I0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RTCBQ9Y3I0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
RTCBQ9Y3I0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.33■■□□□ 1
RTCBQ9Y3I0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.33■■□□□ 1
RTCBQ9Y3I0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 U91328.1-201ENST00000437528 223 ntBASIC21.32■■□□□ 1
RTCBQ9Y3I0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 AC021097.1-201ENST00000607902 574 ntBASIC21.32■■□□□ 1
RTCBQ9Y3I0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.32■■□□□ 1
RTCBQ9Y3I0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTCBQ9Y3I0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RTCBQ9Y3I0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTCBQ9Y3I0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTCBQ9Y3I0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.31■■□□□ 1
RTCBQ9Y3I0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RTCBQ9Y3I0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.31■■□□□ 1
RTCBQ9Y3I0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTCBQ9Y3I0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.31■■□□□ 1
RTCBQ9Y3I0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RTCBQ9Y3I0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RTCBQ9Y3I0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTCBQ9Y3I0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RTCBQ9Y3I0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RTCBQ9Y3I0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.31■■□□□ 1
RTCBQ9Y3I0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RTCBQ9Y3I0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms