Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 AL049757.1-201ENST00000616842 1596 ntBASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 AC103564.2-201ENST00000432853 1299 ntBASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 AL359075.1-203ENST00000462729 1002 ntBASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 AC122714.2-201ENST00000502787 707 ntBASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 GPR89P-201ENST00000407924 1495 ntBASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 STK25P1-201ENST00000585406 838 ntBASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 AL390719.2-201ENST00000606993 987 ntBASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D4Q9Y2X8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms