Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 RNU1-129P-201ENST00000384064 167 ntBASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 ZNF890P-202ENST00000530367 1156 ntBASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 U1.21-201ENST00000580816 167 ntBASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 AL031055.1-201ENST00000606362 631 ntBASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.52■□□□□ 0.87
ZC3H4Q9UPT8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 BTBD7P1-201ENST00000447253 1453 ntBASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 AC105233.2-201ENST00000523697 349 ntBASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 AF228730.5-201ENST00000530288 346 ntBASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 TEX28P1-201ENST00000613479 1221 ntBASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 TEX28P2-201ENST00000617764 1221 ntBASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ZC3H4Q9UPT8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 AL353732.1-201ENST00000569618 1459 ntBASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.5■□□□□ 0.87
ZC3H4Q9UPT8 FAM8A2P-201ENST00000528813 1142 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms