Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC005915.1-201ENST00000624912 2018 ntBASIC19.51■□□□□ 0.71
PCDHA4Q9UN74 TUBB8P12-201ENST00000308911 1335 ntBASIC19.51■□□□□ 0.71
PCDHA4Q9UN74 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHA4Q9UN74 TUBB7P-202ENST00000428444 1305 ntBASIC19.51■□□□□ 0.71
PCDHA4Q9UN74 TUBB8P7-204ENST00000567960 1332 ntBASIC19.51■□□□□ 0.71
PCDHA4Q9UN74 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHA4Q9UN74 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 MRPL20P1-201ENST00000400819 433 ntBASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 AL590627.1-203ENST00000421194 1026 ntBASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 BX640515.1-201ENST00000617215 977 ntBASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHA4Q9UN74 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 AC145285.3-201ENST00000564603 959 ntBASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 PCDHB17P-201ENST00000539533 2393 ntBASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 KRT8P49-201ENST00000604166 1432 ntBASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHA4Q9UN74 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 PRSS29P-201ENST00000440800 595 ntBASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 AC107918.2-201ENST00000530817 355 ntBASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 Z83851.2-201ENST00000609564 659 ntBASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 AD000864.1-201ENST00000624076 2295 ntBASIC19.48■□□□□ 0.71
PCDHA4Q9UN74 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 TOP3BP1-201ENST00000420768 1380 ntBASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms