Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 LINC00895-201ENST00000629028 1637 ntBASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 AL645728.1-201ENST00000366221 2101 ntBASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGC3Q9UN70 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 RNF216P1-203ENST00000404404 2427 ntBASIC18■□□□□ 0.47
PCDHGC3Q9UN70 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGC3Q9UN70 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 AC013467.2-201ENST00000605472 835 ntBASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 AC005593.1-201ENST00000624894 515 ntBASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGC3Q9UN70 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 AC009078.2-202ENST00000463353 338 ntBASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms