Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT4Q9P109 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.65■□□□□ 0.58
GCNT4Q9P109 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT4Q9P109 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.64■□□□□ 0.58
GCNT4Q9P109 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.64■□□□□ 0.58
GCNT4Q9P109 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
GCNT4Q9P109 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 AGGF1P2-201ENST00000426656 2106 ntBASIC18.64■□□□□ 0.57
GCNT4Q9P109 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 ACTG1P4-201ENST00000425123 1122 ntBASIC18.64■□□□□ 0.57
GCNT4Q9P109 KRT18P67-201ENST00000432816 1264 ntBASIC18.64■□□□□ 0.57
GCNT4Q9P109 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 AC079776.4-201ENST00000511039 504 ntBASIC18.64■□□□□ 0.57
GCNT4Q9P109 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 AC148477.8-201ENST00000624298 468 ntBASIC18.64■□□□□ 0.57
GCNT4Q9P109 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 FRMD8P1-201ENST00000440433 1524 ntBASIC18.64■□□□□ 0.57
GCNT4Q9P109 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
GCNT4Q9P109 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT4Q9P109 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 AC097637.2-201ENST00000624096 1997 ntBASIC18.63■□□□□ 0.57
GCNT4Q9P109 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 MTDHP3-201ENST00000594186 672 ntBASIC18.63■□□□□ 0.57
GCNT4Q9P109 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GCNT4Q9P109 AP005117.1-201ENST00000584346 1413 ntBASIC18.63■□□□□ 0.57
GCNT4Q9P109 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNT4Q9P109 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GCNT4Q9P109 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
GCNT4Q9P109 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.62■□□□□ 0.57
GCNT4Q9P109 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.62■□□□□ 0.57
GCNT4Q9P109 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 AL022342.1-201ENST00000400363 863 ntBASIC18.62■□□□□ 0.57
GCNT4Q9P109 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.62■□□□□ 0.57
GCNT4Q9P109 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.62■□□□□ 0.57
GCNT4Q9P109 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.62■□□□□ 0.57
GCNT4Q9P109 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
GCNT4Q9P109 AL773604.1-201ENST00000617417 272 ntBASIC18.62■□□□□ 0.57
GCNT4Q9P109 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.62■□□□□ 0.57
GCNT4Q9P109 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.62■□□□□ 0.57
GCNT4Q9P109 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms