Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 SPDYE15P-201ENST00000424157 909 ntBASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AC092597.1-201ENST00000487352 616 ntBASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AL139327.4-201ENST00000612362 153 ntBASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AC009154.2-201ENST00000621177 724 ntBASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD4L1Q9NU39 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 AC078925.2-201ENST00000624013 1973 ntBASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 AC005104.2-201ENST00000427818 678 ntBASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 MTCYBP32-201ENST00000427945 1084 ntBASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 KRT18P48-201ENST00000434763 852 ntBASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 BNIP3P39-201ENST00000601077 554 ntBASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 AC008033.3-201ENST00000612531 1407 ntBASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
FOXD4L1Q9NU39 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 LINC02012-201ENST00000608206 1725 ntBASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AL022319.1-201ENST00000458183 1167 ntBASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AC034232.1-201ENST00000506026 1064 ntBASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AC114322.1-201ENST00000506771 926 ntBASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AL441883.1-201ENST00000566170 1045 ntBASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AL138966.2-201ENST00000621997 464 ntBASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 AC106730.3-201ENST00000624568 641 ntBASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FOXD4L1Q9NU39 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms