Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 AC005521.1-201ENST00000393351 872 ntBASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 SPDYE13P-201ENST00000445314 798 ntBASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 AC093827.2-201ENST00000512654 315 ntBASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 IGHV3-41-201ENST00000613121 348 ntBASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CDC42SE2Q9NRR3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 AL645929.1-201ENST00000420084 975 ntBASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 AC009533.2-201ENST00000543664 586 ntBASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms