Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.01■□□□□ 0.63
VTA1Q9NP79 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VTA1Q9NP79 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VTA1Q9NP79 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.01■□□□□ 0.63
VTA1Q9NP79 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
VTA1Q9NP79 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VTA1Q9NP79 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.01■□□□□ 0.63
VTA1Q9NP79 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
VTA1Q9NP79 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.01■□□□□ 0.63
VTA1Q9NP79 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VTA1Q9NP79 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.01■□□□□ 0.63
VTA1Q9NP79 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTA1Q9NP79 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VTA1Q9NP79 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VTA1Q9NP79 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
VTA1Q9NP79 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19■□□□□ 0.63
VTA1Q9NP79 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19■□□□□ 0.63
VTA1Q9NP79 AC131009.4-201ENST00000624048 1740 ntBASIC19■□□□□ 0.63
VTA1Q9NP79 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19■□□□□ 0.63
VTA1Q9NP79 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 SPDYE7P-202ENST00000420373 878 ntBASIC19■□□□□ 0.63
VTA1Q9NP79 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
VTA1Q9NP79 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
VTA1Q9NP79 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19■□□□□ 0.63
VTA1Q9NP79 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
VTA1Q9NP79 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19■□□□□ 0.63
VTA1Q9NP79 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19■□□□□ 0.63
VTA1Q9NP79 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
VTA1Q9NP79 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19■□□□□ 0.63
VTA1Q9NP79 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 AL138688.1-201ENST00000624851 1594 ntBASIC19■□□□□ 0.63
VTA1Q9NP79 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
VTA1Q9NP79 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19■□□□□ 0.63
VTA1Q9NP79 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
VTA1Q9NP79 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTA1Q9NP79 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19■□□□□ 0.63
VTA1Q9NP79 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19■□□□□ 0.63
VTA1Q9NP79 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VTA1Q9NP79 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.99■□□□□ 0.63
VTA1Q9NP79 AC116353.5-201ENST00000638148 1699 ntBASIC18.99■□□□□ 0.63
VTA1Q9NP79 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VTA1Q9NP79 AL021920.2-201ENST00000624828 1351 ntBASIC18.99■□□□□ 0.63
VTA1Q9NP79 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
VTA1Q9NP79 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 AC107890.1-201ENST00000422478 521 ntBASIC18.99■□□□□ 0.63
VTA1Q9NP79 AC125807.1-201ENST00000483097 614 ntBASIC18.99■□□□□ 0.63
VTA1Q9NP79 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.99■□□□□ 0.63
VTA1Q9NP79 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
VTA1Q9NP79 MIR4745-201ENST00000577608 62 ntBASIC18.99■□□□□ 0.63
VTA1Q9NP79 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.99■□□□□ 0.63
VTA1Q9NP79 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.99■□□□□ 0.63
VTA1Q9NP79 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 KRT8P49-201ENST00000604166 1432 ntBASIC18.99■□□□□ 0.63
VTA1Q9NP79 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
VTA1Q9NP79 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VTA1Q9NP79 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTA1Q9NP79 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VTA1Q9NP79 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTA1Q9NP79 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTA1Q9NP79 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTA1Q9NP79 AL390961.4-201ENST00000623958 2535 ntBASIC18.98■□□□□ 0.63
VTA1Q9NP79 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTA1Q9NP79 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VTA1Q9NP79 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VTA1Q9NP79 MIR943-201ENST00000401286 94 ntBASIC18.98■□□□□ 0.63
VTA1Q9NP79 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 BASP1P1-201ENST00000430708 665 ntBASIC18.98■□□□□ 0.63
VTA1Q9NP79 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.98■□□□□ 0.63
VTA1Q9NP79 SLC25A39P2-201ENST00000537614 270 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms