Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 METTL21AP1-201ENST00000438852 635 ntBASIC18.38■□□□□ 0.53
NXF3Q9H4D5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 AL513210.1-201ENST00000629608 234 ntBASIC18.38■□□□□ 0.53
NXF3Q9H4D5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 TOP3BP1-201ENST00000420768 1380 ntBASIC18.38■□□□□ 0.53
NXF3Q9H4D5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 AC012569.1-201ENST00000591191 1524 ntBASIC18.38■□□□□ 0.53
NXF3Q9H4D5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
NXF3Q9H4D5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 AC002056.1-201ENST00000395613 760 ntBASIC18.37■□□□□ 0.53
NXF3Q9H4D5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 AP000344.2-201ENST00000512987 629 ntBASIC18.37■□□□□ 0.53
NXF3Q9H4D5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 AL353732.1-201ENST00000569618 1459 ntBASIC18.37■□□□□ 0.53
NXF3Q9H4D5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NXF3Q9H4D5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 AL355306.1-201ENST00000415580 579 ntBASIC18.36■□□□□ 0.53
NXF3Q9H4D5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NXF3Q9H4D5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms