Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 AC008735.5-201ENST00000623544 497 ntBASIC15.87■□□□□ 0.13
UBQLN3Q9H347 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 AC009336.1-201ENST00000608941 1553 ntBASIC15.87■□□□□ 0.13
UBQLN3Q9H347 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 TNRC18P3-201ENST00000441896 2691 ntBASIC15.86■□□□□ 0.13
UBQLN3Q9H347 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 AL590627.1-203ENST00000421194 1026 ntBASIC15.86■□□□□ 0.13
UBQLN3Q9H347 AP000347.1-202ENST00000435868 847 ntBASIC15.86■□□□□ 0.13
UBQLN3Q9H347 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 STK19B-204ENST00000512515 211 ntBASIC15.86■□□□□ 0.13
UBQLN3Q9H347 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 AC012640.2-201ENST00000561606 901 ntBASIC15.86■□□□□ 0.13
UBQLN3Q9H347 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.86■□□□□ 0.13
UBQLN3Q9H347 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.86■□□□□ 0.13
UBQLN3Q9H347 IL9RP2-201ENST00000423948 1312 ntBASIC15.86■□□□□ 0.13
UBQLN3Q9H347 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
UBQLN3Q9H347 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms