Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 AC004980.1-204ENST00000429707 299 ntBASIC13.89□□□□□ -0.19
NKX6-2Q9C056 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 CDCA4P2-201ENST00000441182 718 ntBASIC13.89□□□□□ -0.19
NKX6-2Q9C056 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 AC091390.4-202ENST00000476426 537 ntBASIC13.89□□□□□ -0.19
NKX6-2Q9C056 DUTP2-201ENST00000519164 463 ntBASIC13.89□□□□□ -0.19
NKX6-2Q9C056 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.89□□□□□ -0.19
NKX6-2Q9C056 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 AC016396.2-201ENST00000562575 1417 ntBASIC13.89□□□□□ -0.19
NKX6-2Q9C056 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-2Q9C056 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX6-2Q9C056 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX6-2Q9C056 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms