Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 LINC01711-201ENST00000598340 967 ntBASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
TRIM54Q9BYV2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 SPDYE21P-201ENST00000413323 827 ntBASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 AC132008.2-207ENST00000454517 770 ntBASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 AC106886.4-201ENST00000623557 2502 ntBASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM54Q9BYV2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 PRELID1P1-202ENST00000567272 903 ntBASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM54Q9BYV2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM54Q9BYV2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.89■□□□□ 0.3
TRIM54Q9BYV2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms