Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 FAM8A6P-201ENST00000407496 1135 ntBASIC19.56■□□□□ 0.72
ARID3AQ99856 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.56■□□□□ 0.72
ARID3AQ99856 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.56■□□□□ 0.72
ARID3AQ99856 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ARID3AQ99856 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.56■□□□□ 0.72
ARID3AQ99856 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.56■□□□□ 0.72
ARID3AQ99856 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARID3AQ99856 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ARID3AQ99856 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.55■□□□□ 0.72
ARID3AQ99856 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.55■□□□□ 0.72
ARID3AQ99856 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ARID3AQ99856 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
ARID3AQ99856 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.55■□□□□ 0.72
ARID3AQ99856 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.55■□□□□ 0.72
ARID3AQ99856 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ARID3AQ99856 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ARID3AQ99856 HLA-F-220ENST00000434407 884 ntBASIC19.55■□□□□ 0.72
ARID3AQ99856 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.55■□□□□ 0.72
ARID3AQ99856 SLC25A6P5-201ENST00000435663 894 ntBASIC19.55■□□□□ 0.72
ARID3AQ99856 SPDYE13P-201ENST00000445314 798 ntBASIC19.55■□□□□ 0.72
ARID3AQ99856 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.55■□□□□ 0.72
ARID3AQ99856 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 VENTXP5-201ENST00000523979 775 ntBASIC19.55■□□□□ 0.72
ARID3AQ99856 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ARID3AQ99856 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.55■□□□□ 0.72
ARID3AQ99856 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
ARID3AQ99856 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARID3AQ99856 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ARID3AQ99856 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ARID3AQ99856 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 HBZP1-201ENST00000354915 429 ntBASIC19.54■□□□□ 0.72
ARID3AQ99856 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.54■□□□□ 0.72
ARID3AQ99856 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.54■□□□□ 0.72
ARID3AQ99856 AC083849.1-201ENST00000615227 514 ntBASIC19.54■□□□□ 0.72
ARID3AQ99856 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ARID3AQ99856 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC19.54■□□□□ 0.72
ARID3AQ99856 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.54■□□□□ 0.72
ARID3AQ99856 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ARID3AQ99856 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARID3AQ99856 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARID3AQ99856 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARID3AQ99856 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARID3AQ99856 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ARID3AQ99856 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARID3AQ99856 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARID3AQ99856 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARID3AQ99856 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARID3AQ99856 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ARID3AQ99856 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
ARID3AQ99856 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARID3AQ99856 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.53■□□□□ 0.72
ARID3AQ99856 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms