Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 AC073508.3-201ENST00000619697 1419 ntBASIC16.29■□□□□ 0.2
CGREF1Q99674 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CGREF1Q99674 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CGREF1Q99674 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.29■□□□□ 0.2
CGREF1Q99674 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 RNF152P1-201ENST00000397754 604 ntBASIC16.29■□□□□ 0.2
CGREF1Q99674 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.29■□□□□ 0.2
CGREF1Q99674 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.29■□□□□ 0.2
CGREF1Q99674 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 AC005363.2-201ENST00000618631 242 ntBASIC16.29■□□□□ 0.2
CGREF1Q99674 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.29■□□□□ 0.2
CGREF1Q99674 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 AC009336.1-201ENST00000608941 1553 ntBASIC16.29■□□□□ 0.2
CGREF1Q99674 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 HLA-A-202ENST00000376806 1854 ntBASIC16.29■□□□□ 0.2
CGREF1Q99674 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CGREF1Q99674 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGREF1Q99674 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 AL353593.2-201ENST00000602529 1483 ntBASIC16.29■□□□□ 0.2
CGREF1Q99674 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CGREF1Q99674 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.28■□□□□ 0.2
CGREF1Q99674 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CGREF1Q99674 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.28■□□□□ 0.2
CGREF1Q99674 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.28■□□□□ 0.2
CGREF1Q99674 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 SPDYE13P-201ENST00000445314 798 ntBASIC16.28■□□□□ 0.2
CGREF1Q99674 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.28■□□□□ 0.2
CGREF1Q99674 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 AC005336.2-201ENST00000593183 939 ntBASIC16.28■□□□□ 0.2
CGREF1Q99674 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.28■□□□□ 0.2
CGREF1Q99674 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CGREF1Q99674 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.28■□□□□ 0.2
CGREF1Q99674 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.28■□□□□ 0.2
CGREF1Q99674 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGREF1Q99674 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.28■□□□□ 0.2
CGREF1Q99674 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CGREF1Q99674 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.27■□□□□ 0.2
CGREF1Q99674 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.27■□□□□ 0.2
CGREF1Q99674 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CGREF1Q99674 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CGREF1Q99674 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGREF1Q99674 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.27■□□□□ 0.2
CGREF1Q99674 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGREF1Q99674 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGREF1Q99674 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.27■□□□□ 0.2
CGREF1Q99674 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CGREF1Q99674 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGREF1Q99674 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CGREF1Q99674 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGREF1Q99674 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CGREF1Q99674 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms