Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 KRT8P48-201ENST00000515599 1220 ntBASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC85AQ96PX6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 HMGA1P7-201ENST00000406908 502 ntBASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 AC004449.1-201ENST00000564240 433 ntBASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 AC093525.9-201ENST00000624961 1746 ntBASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 AC068880.1-201ENST00000507289 2297 ntBASIC21.15■□□□□ 0.98
CCDC85AQ96PX6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CCDC85AQ96PX6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC85AQ96PX6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC85AQ96PX6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC85AQ96PX6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
CCDC85AQ96PX6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC85AQ96PX6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC85AQ96PX6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC85AQ96PX6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC85AQ96PX6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 AL671277.1-201ENST00000429656 993 ntBASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 AC109322.1-201ENST00000524499 1264 ntBASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 AC093520.2-201ENST00000561830 333 ntBASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 AC090340.1-201ENST00000620778 4980 ntBASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 EGFEM1P-202ENST00000431685 1563 ntBASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC85AQ96PX6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC85AQ96PX6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms