Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 AC108073.2-201ENST00000464002 357 ntBASIC14.21□□□□□ -0.13
GAFA1Q96PS6 IGHV3-22-201ENST00000520721 359 ntBASIC14.21□□□□□ -0.13
GAFA1Q96PS6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 AL121761.2-201ENST00000598007 1648 ntBASIC14.21□□□□□ -0.13
GAFA1Q96PS6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 AC020916.1-201ENST00000587762 1774 ntBASIC14.21□□□□□ -0.13
GAFA1Q96PS6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
GAFA1Q96PS6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GAFA1Q96PS6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GAFA1Q96PS6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.21□□□□□ -0.14
GAFA1Q96PS6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
GAFA1Q96PS6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GAFA1Q96PS6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 AC108751.1-201ENST00000490852 363 ntBASIC14.2□□□□□ -0.14
GAFA1Q96PS6 SLC25A6P2-201ENST00000497974 877 ntBASIC14.2□□□□□ -0.14
GAFA1Q96PS6 RNA5SP415-201ENST00000517246 115 ntBASIC14.2□□□□□ -0.14
GAFA1Q96PS6 UNC93B6-202ENST00000528242 690 ntBASIC14.2□□□□□ -0.14
GAFA1Q96PS6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 AC002310.6-201ENST00000624451 1377 ntBASIC14.2□□□□□ -0.14
GAFA1Q96PS6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
GAFA1Q96PS6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms