Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 MTHFR-217ENST00000641820 1569 ntBASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHMP6Q96FZ7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 AL353719.1-201ENST00000566847 864 ntBASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP6Q96FZ7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
CHMP6Q96FZ7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CHMP6Q96FZ7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP6Q96FZ7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP6Q96FZ7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP6Q96FZ7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP6Q96FZ7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP6Q96FZ7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 TSPY15P-201ENST00000457163 923 ntBASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 AC128688.1-201ENST00000487626 519 ntBASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 NAPSB-206ENST00000562112 1266 ntBASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP6Q96FZ7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 ALOX12P2-203ENST00000570921 1945 ntBASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms