Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 NCF1C-201ENST00000438382 1427 ntBASIC17.63■□□□□ 0.41
HDAC11Q96DB2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HDAC11Q96DB2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 AD000864.1-201ENST00000624076 2295 ntBASIC17.62■□□□□ 0.41
HDAC11Q96DB2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 AF238378.1-201ENST00000526806 358 ntBASIC17.62■□□□□ 0.41
HDAC11Q96DB2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 SART3-203ENST00000546611 1184 ntBASIC17.62■□□□□ 0.41
HDAC11Q96DB2 AL353135.1-201ENST00000606729 504 ntBASIC17.62■□□□□ 0.41
HDAC11Q96DB2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 FRMD8P1-201ENST00000440433 1524 ntBASIC17.62■□□□□ 0.41
HDAC11Q96DB2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC11Q96DB2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 DUSP5P1-201ENST00000441325 1139 ntBASIC17.61■□□□□ 0.41
HDAC11Q96DB2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 SCARNA2-201ENST00000458748 420 ntBASIC17.61■□□□□ 0.41
HDAC11Q96DB2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC11Q96DB2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 UNC93B7-201ENST00000509439 705 ntBASIC17.6■□□□□ 0.41
HDAC11Q96DB2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 AL589182.2-201ENST00000619332 1049 ntBASIC17.6■□□□□ 0.41
HDAC11Q96DB2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HDAC11Q96DB2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms