Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.65■□□□□ 0.26
NCLNQ969V3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.65■□□□□ 0.26
NCLNQ969V3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.65■□□□□ 0.26
NCLNQ969V3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.65■□□□□ 0.26
NCLNQ969V3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCLNQ969V3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NCLNQ969V3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.65■□□□□ 0.26
NCLNQ969V3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCLNQ969V3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.65■□□□□ 0.26
NCLNQ969V3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.65■□□□□ 0.26
NCLNQ969V3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCLNQ969V3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.65■□□□□ 0.26
NCLNQ969V3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.65■□□□□ 0.26
NCLNQ969V3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.64■□□□□ 0.26
NCLNQ969V3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.64■□□□□ 0.25
NCLNQ969V3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
NCLNQ969V3 NUS1P2-201ENST00000417358 873 ntBASIC16.64■□□□□ 0.25
NCLNQ969V3 AL450487.1-201ENST00000426799 995 ntBASIC16.64■□□□□ 0.25
NCLNQ969V3 AC096582.2-201ENST00000510860 516 ntBASIC16.64■□□□□ 0.25
NCLNQ969V3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NCLNQ969V3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
NCLNQ969V3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCLNQ969V3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
NCLNQ969V3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.63■□□□□ 0.25
NCLNQ969V3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.63■□□□□ 0.25
NCLNQ969V3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.63■□□□□ 0.25
NCLNQ969V3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.63■□□□□ 0.25
NCLNQ969V3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
NCLNQ969V3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.63■□□□□ 0.25
NCLNQ969V3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.63■□□□□ 0.25
NCLNQ969V3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.63■□□□□ 0.25
NCLNQ969V3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.63■□□□□ 0.25
NCLNQ969V3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
NCLNQ969V3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
NCLNQ969V3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.63■□□□□ 0.25
NCLNQ969V3 BNIP3P18-201ENST00000593976 575 ntBASIC16.63■□□□□ 0.25
NCLNQ969V3 AL138831.2-201ENST00000606564 490 ntBASIC16.63■□□□□ 0.25
NCLNQ969V3 AL732292.2-201ENST00000609649 430 ntBASIC16.63■□□□□ 0.25
NCLNQ969V3 AL121772.3-201ENST00000610840 674 ntBASIC16.63■□□□□ 0.25
NCLNQ969V3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.63■□□□□ 0.25
NCLNQ969V3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCLNQ969V3 KRT8P47-201ENST00000604727 1398 ntBASIC16.63■□□□□ 0.25
NCLNQ969V3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 AC125634.1-201ENST00000438758 1403 ntBASIC16.62■□□□□ 0.25
NCLNQ969V3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.62■□□□□ 0.25
NCLNQ969V3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms