Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 MTDHP4-201ENST00000600287 670 ntBASIC16.46■□□□□ 0.23
UBE2E3Q969T4 AC064862.7-201ENST00000604520 867 ntBASIC16.46■□□□□ 0.23
UBE2E3Q969T4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 AL021920.2-201ENST00000624828 1351 ntBASIC16.46■□□□□ 0.23
UBE2E3Q969T4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2E3Q969T4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBE2E3Q969T4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
UBE2E3Q969T4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 AL590787.1-201ENST00000568856 1315 ntBASIC16.45■□□□□ 0.22
UBE2E3Q969T4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.45■□□□□ 0.22
UBE2E3Q969T4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 AKR1C7P-201ENST00000305623 895 ntBASIC16.45■□□□□ 0.22
UBE2E3Q969T4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 SART3-203ENST00000546611 1184 ntBASIC16.45■□□□□ 0.22
UBE2E3Q969T4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.45■□□□□ 0.22
UBE2E3Q969T4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 AC022211.2-201ENST00000585075 2527 ntBASIC16.44■□□□□ 0.22
UBE2E3Q969T4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 AP002414.1-201ENST00000391405 1147 ntBASIC16.44■□□□□ 0.22
UBE2E3Q969T4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 AC012313.10-201ENST00000623509 926 ntBASIC16.44■□□□□ 0.22
UBE2E3Q969T4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.44■□□□□ 0.22
UBE2E3Q969T4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2E3Q969T4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms