Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
CDKL2Q92772 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKL2Q92772 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKL2Q92772 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKL2Q92772 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKL2Q92772 BX276092.5-203ENST00000456199 560 ntBASIC17.3■□□□□ 0.36
CDKL2Q92772 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL2Q92772 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKL2Q92772 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.3■□□□□ 0.36
CDKL2Q92772 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CDKL2Q92772 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDKL2Q92772 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDKL2Q92772 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL2Q92772 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDKL2Q92772 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKL2Q92772 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKL2Q92772 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CDKL2Q92772 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKL2Q92772 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CDKL2Q92772 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDKL2Q92772 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CDKL2Q92772 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKL2Q92772 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKL2Q92772 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.29■□□□□ 0.36
CDKL2Q92772 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 AC011467.2-201ENST00000598425 242 ntBASIC17.29■□□□□ 0.36
CDKL2Q92772 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.29■□□□□ 0.36
CDKL2Q92772 AL121672.3-201ENST00000608644 468 ntBASIC17.29■□□□□ 0.36
CDKL2Q92772 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.29■□□□□ 0.36
CDKL2Q92772 FRMD8P1-201ENST00000440433 1524 ntBASIC17.29■□□□□ 0.36
CDKL2Q92772 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKL2Q92772 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
CDKL2Q92772 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDKL2Q92772 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDKL2Q92772 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL2Q92772 AC132938.5-201ENST00000624980 1813 ntBASIC17.28■□□□□ 0.36
CDKL2Q92772 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDKL2Q92772 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL2Q92772 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL2Q92772 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL2Q92772 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.28■□□□□ 0.36
CDKL2Q92772 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL2Q92772 CHCHD2P8-201ENST00000429873 447 ntBASIC17.28■□□□□ 0.36
CDKL2Q92772 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL2Q92772 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.28■□□□□ 0.36
CDKL2Q92772 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDKL2Q92772 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
CDKL2Q92772 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL2Q92772 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDKL2Q92772 AD001527.2-201ENST00000622994 785 ntBASIC17.28■□□□□ 0.36
CDKL2Q92772 AC073592.5-201ENST00000624854 528 ntBASIC17.28■□□□□ 0.36
CDKL2Q92772 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKL2Q92772 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL2Q92772 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL2Q92772 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDKL2Q92772 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CDKL2Q92772 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL2Q92772 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms