Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.8■□□□□ 0.12
CNOT9Q92600 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CNOT9Q92600 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.79■□□□□ 0.12
CNOT9Q92600 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.79■□□□□ 0.12
CNOT9Q92600 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CNOT9Q92600 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.79■□□□□ 0.12
CNOT9Q92600 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CNOT9Q92600 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.79■□□□□ 0.12
CNOT9Q92600 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CNOT9Q92600 ACTG1P4-201ENST00000425123 1122 ntBASIC15.79■□□□□ 0.12
CNOT9Q92600 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.79■□□□□ 0.12
CNOT9Q92600 BX005266.1-201ENST00000473402 457 ntBASIC15.79■□□□□ 0.12
CNOT9Q92600 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.79■□□□□ 0.12
CNOT9Q92600 KRT18P31-201ENST00000506277 1292 ntBASIC15.79■□□□□ 0.12
CNOT9Q92600 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.79■□□□□ 0.12
CNOT9Q92600 AC106795.1-205ENST00000512851 1056 ntBASIC15.79■□□□□ 0.12
CNOT9Q92600 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.79■□□□□ 0.12
CNOT9Q92600 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.79■□□□□ 0.12
CNOT9Q92600 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.79■□□□□ 0.12
CNOT9Q92600 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.79■□□□□ 0.12
CNOT9Q92600 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CNOT9Q92600 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.79■□□□□ 0.12
CNOT9Q92600 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNOT9Q92600 FRMD8P1-201ENST00000440433 1524 ntBASIC15.78■□□□□ 0.12
CNOT9Q92600 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.78■□□□□ 0.12
CNOT9Q92600 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CNOT9Q92600 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
CNOT9Q92600 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 LINC00982-205ENST00000420957 435 ntBASIC15.78■□□□□ 0.12
CNOT9Q92600 AGGF1P2-201ENST00000426656 2106 ntBASIC15.78■□□□□ 0.12
CNOT9Q92600 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.78■□□□□ 0.12
CNOT9Q92600 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.78■□□□□ 0.12
CNOT9Q92600 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.78■□□□□ 0.12
CNOT9Q92600 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.78■□□□□ 0.12
CNOT9Q92600 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.78■□□□□ 0.12
CNOT9Q92600 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.78■□□□□ 0.12
CNOT9Q92600 AL121772.3-201ENST00000610840 674 ntBASIC15.78■□□□□ 0.12
CNOT9Q92600 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.78■□□□□ 0.12
CNOT9Q92600 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.78■□□□□ 0.12
CNOT9Q92600 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.78■□□□□ 0.12
CNOT9Q92600 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.78■□□□□ 0.12
CNOT9Q92600 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT9Q92600 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
CNOT9Q92600 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.78■□□□□ 0.12
CNOT9Q92600 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT9Q92600 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CNOT9Q92600 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT9Q92600 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT9Q92600 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT9Q92600 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms