Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 HARS-203ENST00000431330 1774 ntTSL 2 BASIC22.23■■□□□ 1.15
RTF1Q92541 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC22.23■■□□□ 1.15
RTF1Q92541 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.23■■□□□ 1.15
RTF1Q92541 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.23■■□□□ 1.15
RTF1Q92541 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC22.23■■□□□ 1.15
RTF1Q92541 MIR4515-201ENST00000584082 81 ntBASIC22.23■■□□□ 1.15
RTF1Q92541 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.23■■□□□ 1.15
RTF1Q92541 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC22.23■■□□□ 1.15
RTF1Q92541 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RTF1Q92541 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.23■■□□□ 1.15
RTF1Q92541 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTF1Q92541 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC22.23■■□□□ 1.15
RTF1Q92541 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RTF1Q92541 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC22.22■■□□□ 1.15
RTF1Q92541 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTF1Q92541 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC22.22■■□□□ 1.15
RTF1Q92541 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
RTF1Q92541 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTF1Q92541 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTF1Q92541 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTF1Q92541 AC254562.1-201ENST00000417586 456 ntBASIC22.22■■□□□ 1.15
RTF1Q92541 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.22■■□□□ 1.15
RTF1Q92541 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RTF1Q92541 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC22.22■■□□□ 1.15
RTF1Q92541 CITED2-204ENST00000618718 901 ntTSL 2 BASIC22.22■■□□□ 1.15
RTF1Q92541 AC092902.6-201ENST00000641783 218 ntBASIC22.22■■□□□ 1.15
RTF1Q92541 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.22■■□□□ 1.15
RTF1Q92541 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTF1Q92541 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTF1Q92541 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
RTF1Q92541 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTF1Q92541 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RTF1Q92541 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
RTF1Q92541 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTF1Q92541 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
RTF1Q92541 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 LINC00896-202ENST00000609602 2128 ntBASIC22.21■■□□□ 1.15
RTF1Q92541 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC22.21■■□□□ 1.15
RTF1Q92541 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.21■■□□□ 1.15
RTF1Q92541 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC22.21■■□□□ 1.15
RTF1Q92541 AC112191.1-201ENST00000523689 701 ntBASIC22.21■■□□□ 1.15
RTF1Q92541 PUS1-205ENST00000535067 838 ntTSL 3 BASIC22.21■■□□□ 1.15
RTF1Q92541 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.21■■□□□ 1.15
RTF1Q92541 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RTF1Q92541 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
RTF1Q92541 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.21■■□□□ 1.15
RTF1Q92541 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RTF1Q92541 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
RTF1Q92541 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RTF1Q92541 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RTF1Q92541 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTF1Q92541 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RTF1Q92541 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
RTF1Q92541 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
RTF1Q92541 AC026471.1-201ENST00000564629 3026 ntBASIC22.2■■□□□ 1.15
RTF1Q92541 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RTF1Q92541 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTF1Q92541 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTF1Q92541 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTF1Q92541 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTF1Q92541 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTF1Q92541 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTF1Q92541 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTF1Q92541 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RTF1Q92541 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTF1Q92541 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTF1Q92541 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.2■■□□□ 1.14
RTF1Q92541 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
RTF1Q92541 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC22.2■■□□□ 1.14
RTF1Q92541 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms